Instructions
Please use the search settings above to choose your search mode
and the data set you wish to explore.
Data Set
Strain: allows users to choose the dataset to explore
For Score type, Aggreate and Version, default settings are '2Z+8',
'Averages' and '3.2'.
Columns
Check Display box under ‘Std Dev’ if you wish to view standard deviation for each
probe.
DEM, Paraclique and CDSM, each refers to the bioinformatic analysis on B6 and D2
transcriptome data.
To view these analyses, check display box and check require box if you wish to view only
the data entries that have associated informatics analysis.
Mode
Symbol/probe search mode allows search by probe id, gene name or symbol. Multiple genes can be
searched by entering genes with standard delimiters such as spaces, commas and
semi-colons.
The advanced search mode allows fine grained column-based searching (further instructions can be found
once the application has been launched). If you intend to perform searches based
on the higher level analysis, please ensure that you check the appropriate
columns (Display columns for DEM, Paraclique and/or CDSM) prior to launching the
advanced search.
The DEM Explorer is an innovative graphical interface that allows you to select time windows for when genes
are turned on and off as well as specify numeric thresholds for gene expression
to further refine your results. This mode is only available for datasets that
have associated DEM analysis.
The checkbox ‘Show search results on a new page’ allows users to choose to view iterative search results within
the same window or display each result in a new window.
Once you have performed your search and selected one or more probes, the probes can be graphed or saved with
'Graph' or 'Create Gene Set' button. Note that because the columns and probes in the results vary as you update your search criteria and data set, it is not always possible to preserve
your probe selections and search criteria as you proceed. These settings will be
preserved whenever possible and you will be informed whenever the system needs
to update them.